MarLys AMP: diamond Comparative Analysis

Run New Analysis

Query Database:

Reference Database:

Perform additional self-comparison of reference database

To ensure smooth performance, the interactive results on the website display a sample of up to 10000 records. The complete results will be available in downloadable TSV files and in charts included in the generated report

Analysis Summary

Query Database

Reference Database

Query DB Sequences (cleaned)

Ref DB Sequences (cleaned)

Removed Seq (Query DB)

Removed Seq (Ref DB)

Seq with no hits (Query DB)

Seq with no hits (Ref DB)

Seq with no hits (Ref DB self-comp)

Number of Alignments

100% Identity Alignments

50% Identity Alignments

<25% Identity Alignments

DAIRI

IDAIRI

Results Visualization

Scatter Plot: Length vs % Identity (Alignment Count)

Click on a point of interest on the chart to add its data to the report.

% Identity Histogram

Click on a bar of interest on the chart to add its data to the report.

3D Visualization (Length / % Identity / Alignment Count)

Detailed Comparison Results

Report Preparation and Options

Options for "Main Results" section in report:

Show alignments with 100% identity

(Max: records)

Show alignments with 50% identity

(Max: records)

Show alignments with <25% identity

(Max: records)

Show alignments with custom % identity

Min %ID: Max %ID: (Max: records)

Show query database sequences with no hits

(Max: records)

Show reference database sequences with no hits

(Max: records)

Add charts from reference database self-comparison to main results

Data from charts added to report:

No data points from charts have been added yet. Click on a point/bar in a chart to add it.

Custom report sections:

For report clarity, HTML report tables display up to 100 records. To download all data for a given category, click the corresponding 'Download TSV' button.

Note: Generating a report with many custom sections may take a moment.

Run New Analysis

Analysis Summary

Results Visualization

Scatter Plot: Length vs % Identity (Alignment Count)

Filter data on the scatter plot (by alignment length or % identity):

% Identity Histogram

Filter data on the histogram (by alignment length):

3D Visualization (Length / % Identity / Alignment Count)

Detailed Comparison Results

Report Preparation and Options

Options for "Main Results" section in report:

Data from charts added to report:

Custom report sections: